Label | Name of data file/data set | File types (file extension) | Data repository and identifier (DOI or accession number) |
---|---|---|---|
Additional file 1 | Methods | PDF file (.pdf) | Figshare https://doi.org/10.6084/m9.figshare.13604102.v3 [18] |
Data file 1 | Taxonomic sampling | Image file (.png) | Figshare https://doi.org/10.6084/m9.figshare.13603511.v1 [19] |
Data set 1 | Proteome set description | Text files (.csv,.html) | Figshare https://doi.org/10.6084/m9.figshare.13113893.v1 [20] |
Data set 2 | Proteome files | FASTA files (.tar.gz) | Figshare https://doi.org/10.6084/m9.figshare.13573424.v2 [21] |
Data file 2 | BUSCO report | Text file (.csv) | Figshare https://doi.org/10.6084/m9.figshare.13235045.v1 [22] |
Data set 3 | Forty-Two reports and configuration files | Text files (.tsv,.csv,.yaml) | Figshare https://doi.org/10.6084/m9.figshare.13235063.v3 [23] |
Data file 3 | Orthogroup properties | Image file (.pdf) | Figshare https://doi.org/10.6084/m9.figshare.13312622.v1 [24] |
Data set 4 | Orthogroups | FASTA files, YAML configuration file (.tar.gz) | Figshare https://doi.org/10.6084/m9.figshare.13573658.v3 [25] |
Data set 5 | Clans | FASTA files (.tar.gz) | Figshare https://doi.org/10.6084/m9.figshare.13573415.v1 [26] |
Data file 4 | Organelle database | Text file (.tsv) | Figshare https://doi.org/10.6084/m9.figshare.13246841.v1 [27] |
Data file 5 | Plastid-targeted proteins | Spreadsheet (.xlsx) | Figshare https://doi.org/10.6084/m9.figshare.13246784.v1 [28] |
Data file 6 | eggNOG OG annotations | Text file (.tsv) | Figshare https://doi.org/10.6084/m9.figshare.13415048.v1 [29] |
Data file 7 | eggNOG clan annotations | Text file (.tsv) | Figshare https://doi.org/10.6084/m9.figshare.13415060.v1 [30] |