Table 1 Overview of data files/data sets

Data file 1

Methods

PDF file (.pdf)

Figshare https://doi.org/10.6084/m9.figshare.14079866.v5 [20]

Data set 1

Forty-Two reports and configuration files (662 individual samples)

Text files (.tsv,.csv,.yaml)

Figshare https://doi.org/10.6084/m9.figshare.12362699.v1 [21]

Data file 2

Consolidation table

Spreadsheet (.xlsx)

Figshare https://doi.org/10.6084/m9.figshare.14727411.v3 [22]

Data file 3

Sample consolidation report

Image file (.pdf)

Figshare https://doi.org/10.6084/m9.figshare.12154824.v3 [23]

Data file 4

Redundancy drop analysis

Spreadsheet (.xlsx)

Figshare https://doi.org/10.6084/m9.figshare.12213731.v3 [24]

Data set 2

Transcriptomes

FASTA files (.tar.gz)

Figshare https://doi.org/10.6084/m9.figshare.13634840.v1 [25]

Data file 5

Sobek analysis summary

Text file (.csv)

Figshare https://doi.org/10.6084/m9.figshare.12410522.v3 [26]

Data set 3

Forty-Two reports and configuration files (260 transcriptomes)

Text files (.tsv,.csv,.yaml)

Figshare https://doi.org/10.6084/m9.figshare.13006622.v1 [27]

Data file 6

Consolidated sample purity (cross-contaminations)

Image file (.pdf)

Figshare https://doi.org/10.6084/m9.figshare.12173235.v3 [28]

Data file 7

Consolidated sample purity (contaminations)

Image file (.pdf)

Figshare https://doi.org/10.6084/m9.figshare.12998726.v3 [29]

Data file 8

Completeness analysis

Text file (.csv)

Figshare https://doi.org/10.6084/m9.figshare.12154833.v3 [30]

Data set 4

Taxonomic samplings

Image files (.png,.html,)

Figshare https://doi.org/10.6084/m9.figshare.12401639.v1 [31]

Data set 5

GAPDH phylogenies

Image files, text file (.pdf)

Figshare https://doi.org/10.6084/m9.figshare.13096208.v2 [32]