Table 1 Overview of data files
Label | Name of data file/data set | File types (file extension) | Data repository and identifier (DOI or accession number) |
|---|---|---|---|
Data set 1 | Complete genome file of T. pyogenes Arash114 strain | Fasta file (.fasta) | ENA/EMBL (https://identifiers.org/insdc.gca:GCA_003055835.1) [11] |
Data set 2 | Raw sequencing data of T. pyogenes Arash114 strain | Fastq file (.fastq.gz) | ENA/EMBL (https://identifiers.org/ncbi/insdc:CP028833) [12] |
Data file 2 | Gene annotation results of T. pyogenes Arash114 strain | Tab separated values (.tsv) | HARVARD Dataverse (https://doi.org/10.7910/DVN/HAJYNP) [17] |
Data file 3 | CRISPR spacers of T. pyogenes Arash114 strain | Text file (.txt) | HARVARD Dataverse (https://doi.org/10.7910/DVN/HAJYNP) [18] |
Data file 4 | CRISPR sequences of T. pyogenes Arash114 strain | Text file (.txt) | HARVARD Dataverse (https://doi.org/10.7910/DVN/HAJYNP) [19] |
Data file 5 | Antimicrobial resistance genes of T. pyogenes Arash114 strain based on ResFinder database | Comma-separated values (.csv) | HARVARD Dataverse (https://doi.org/10.7910/DVN/HAJYNP) [20] |
Data file 6 | Antimicrobial resistance genes of T. pyogenes Arash114 strain based on card database | Comma-separated values (.csv) | HARVARD Dataverse (https://doi.org/10.7910/DVN/HAJYNP) [23] |
Data file 7 | Antimicrobial resistance genes of T. pyogenes Arash114 strain based on NCBIAMRFinderPlus database | Comma-separated values (.csv) | HARVARD Dataverse (https://doi.org/10.7910/DVN/HAJYNP) [24] |