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Fig. 3 | BMC Research Notes

Fig. 3

From: An effective processing pipeline for harmonizing DNA methylation data from Illumina’s 450K and EPIC platforms for epidemiological studies

Fig. 3

Correlation of Technical Replicates. Density plots of correlations across the platform technical replicates for each probe (n = 12, green) as well as a random subset of pairs for comparison (n = 12, purple) for the data normalized using A SeSAMe and B SWAN. The median correlation coefficient among technical replicates is both 0.41 in the SeSAMe and SWAN methods. The 1st and 3rd quartiles for technical replicates for SeSAMe and SWAN were (0.06, 0.72) and (0.11, 0.67) respectively

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