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Table 2 Percent similarity between the R0 gene nucleotide sequences of the 14 HDV samples from Cameroonian Pygmy populations and the representatives of the 8 reference HDV genotypes

From: Endemicity and genetic diversity of Hepatitis delta virus among Pygmies in Cameroon, Central Africa

  HDV-1 HDV-2 HDV-3 HDV-4 HDV-5 HDV-6 HDV-7 HDV-8
PYG70 82.6 71 60.2 71.1 65.9 66.4 66.4 67.1
R0Bobak-115 83 71.9 60.2 71.2 66.5 66.9 66.6 67.3
Mebak-58 81.6 70.7 60.4 70.3 67.5 67 69.5 68.4
Lobak-47 85 71.3 61.5 70.6 68 66.9 68 68.8
R0PYM16 87.1 72.6 61.8 71.4 69 68.3 68.1 68.6
R0PYM23 82.9 70.7 60.5 68.9 66.5 66.3 66 67.2
R0Bobak-118 85.5 71.4 61.1 71.7 67.4 67.7 67 68.1
R0Bobak-66 85.3 71.8 61.6 71.6 67.2 67.6 67 67.8
R0Mebak-61 84 70.4 60.3 70.1 66.3 66.6 66.2 67.2
R0PYG-56 68 67.9 59.6 69.6 69.9 67.7 86.8 73.6
Bobak95 69 67.9 59.5 69.9 68.5 69 81 74.6
Mebak57 65.5 64.8 57.4 66.4 67.2 66.5 77,4 70.7
R0PYG65 59.6 59.9 54.2 62.6 63 61.4 72.2 65.8
R0PYG48 59.8 60 55.3 62.4 64.4 62.5 73.9 67.4