Table 2 Percent similarity between the R0 gene nucleotide sequences of the 14 HDV samples from Cameroonian Pygmy populations and the representatives of the 8 reference HDV genotypes
From: Endemicity and genetic diversity of Hepatitis delta virus among Pygmies in Cameroon, Central Africa
HDV-1 | HDV-2 | HDV-3 | HDV-4 | HDV-5 | HDV-6 | HDV-7 | HDV-8 | |
|---|---|---|---|---|---|---|---|---|
PYG70 | 82.6 | 71 | 60.2 | 71.1 | 65.9 | 66.4 | 66.4 | 67.1 |
R0Bobak-115 | 83 | 71.9 | 60.2 | 71.2 | 66.5 | 66.9 | 66.6 | 67.3 |
Mebak-58 | 81.6 | 70.7 | 60.4 | 70.3 | 67.5 | 67 | 69.5 | 68.4 |
Lobak-47 | 85 | 71.3 | 61.5 | 70.6 | 68 | 66.9 | 68 | 68.8 |
R0PYM16 | 87.1 | 72.6 | 61.8 | 71.4 | 69 | 68.3 | 68.1 | 68.6 |
R0PYM23 | 82.9 | 70.7 | 60.5 | 68.9 | 66.5 | 66.3 | 66 | 67.2 |
R0Bobak-118 | 85.5 | 71.4 | 61.1 | 71.7 | 67.4 | 67.7 | 67 | 68.1 |
R0Bobak-66 | 85.3 | 71.8 | 61.6 | 71.6 | 67.2 | 67.6 | 67 | 67.8 |
R0Mebak-61 | 84 | 70.4 | 60.3 | 70.1 | 66.3 | 66.6 | 66.2 | 67.2 |
R0PYG-56 | 68 | 67.9 | 59.6 | 69.6 | 69.9 | 67.7 | 86.8 | 73.6 |
Bobak95 | 69 | 67.9 | 59.5 | 69.9 | 68.5 | 69 | 81 | 74.6 |
Mebak57 | 65.5 | 64.8 | 57.4 | 66.4 | 67.2 | 66.5 | 77,4 | 70.7 |
R0PYG65 | 59.6 | 59.9 | 54.2 | 62.6 | 63 | 61.4 | 72.2 | 65.8 |
R0PYG48 | 59.8 | 60 | 55.3 | 62.4 | 64.4 | 62.5 | 73.9 | 67.4 |