Table 1 Overview of data files/data sets
Label | Name of data file/data set | File types (file extension) | Data repository and identifier (DOI or accession number) |
|---|---|---|---|
Data file 1 | RNA-seq datasets from NCBI | Table file (.doc) | Figshare https://doi.org/10.6084/m9.figshare.19174214 [24] |
Data file 2 | RNA-seq dataset obtained in this study | Fastq file (.fastq) | NCBI https://identifiers.org/ncbi/bioproject:PRJNA752284 [25] |
Data file 3 | MultiQC reads quality results | Image file (.jpg) | Figshare https://doi.org/10.6084/m9.figshare.18480635 [26] |
Data file 4 | Trinity RNA-seq de novo transcriptome assembly | Fasta file (.fasta) | Figshare https://doi.org/10.6084/m9.figshare.18300896 [27] |
Data file 5 | rnaSPAdes RNA-seq de novo transcriptome assembly | Fasta file (.fasta) | Figshare https://doi.org/10.6084/m9.figshare.18301337 [28] |
Data file 6 | Oases RNA-seq de novo transcriptome assembly | Fasta file (.fasta) | Figshare https://doi.org/10.6084/m9.figshare.18480689 [29] |
Data file 7 | Anisakis pegreffii RNA-seq de novo transcriptome assembly | Fastq file (.fastq) | ENA |
Data file 8 | Unigenes | Fasta file (.fasta) | Figshare https://doi.org/10.6084/m9.figshare.18301772 [31] |
Data file 9 | Open reading frames (ORFs) prediction | Fasta file (.fasta) | Figshare https://doi.org/10.6084/m9.figshare.18302102 [32] |
Data file 10 | Functional annotation from non-redundant (nr) NCBI | Text file (.txt) | Figshare https://doi.org/10.6084/m9.figshare.18295190 [33] |
Data file 11 | Functional annotation from Swiss-Prot | Text file (.txt) | Figshare https://doi.org/10.6084/m9.figshare.18295970 [34] |
Data file 12 | Functional annotation from TrEMBL UniProt | Text file (.txt) | Figshare https://doi.org/10.6084/m9.figshare.18296603 [35] |
Data file 13 | Functional annotation from non-redundant (nr) protein NCBI | Text file (.txt) | Figshare https://doi.org/10.6084/m9.figshare.18296933 [36] |
Data file 14 | Functional annotation from Swiss-Prot Protein | Text file (.txt) | Figshare https://doi.org/10.6084/m9.figshare.18297410 [37] |
Data file 15 | Functional annotation from TrEMBL UniProt Protein | Text file (.txt) | Figshare https://doi.org/10.6084/m9.figshare.18297938 [38] |
Data file 16 | InterProScan results | Text file (.txt) | Figshare https://doi.org/10.6084/m9.figshare.18298319 [39] |