Primer name | Primer sequence (5'-3') | Tm°C | Size (bp) | Use |
---|---|---|---|---|
OsRAD51 Exon 1-2-F | CCTCACATCCCGAGCATCTC | 60 | 171 | Cloning of full-length cDNA of wheat RAD51 |
OsRAD51 Exon 1-2-R | TCACATCAACTGCAGCTATTCCAG | Â | Â | Â |
OsRAD51 Exon 8-9-F | GGTAGTGGCCCAAGTGGATG | 60 | 564 | Â |
OsRAD51 Exon 8-9-R | TGGTGGTCCAATATCACATAGGAG | Â | Â | Â |
OsRAD51 Exon 1-7-F | ATGTCGTCGGCGGCGG | 65 | 889 | Â |
OsRAD51 Exon 1-7-R | CTCATCCGCTAATTTCTGAAGGC | Â | Â | Â |
OsRAD51 Exon 2-9-F | AAGTCGATAAGATAAT TGAAGCA | 60 | 879 | Â |
OsRAD51 Exon 2-9-R | CTGAAACCTTGCTTCAGCT | Â | Â | Â |
NotI-(dT)18 | AACTGGAAGAATTCGCGGCCGCAGGAA(T)18 | Â | Â | Cloning of full-length cDNA of wheat DMC1 |
Not I(dT) anchor | AACTGGAAGAATTCGCGG | Â | Â | Â |
TaDMC1 -DGSP1 | GAAGAGCCTTTCAGGCTTCTG | 55 | 700 | Â |
TaDMC1- DGSP2 | GGTGAACTTGCAGAGCGCCAG | 55 | 772 | Â |
TaDMC1- DGSP3 | CTGGCGCTCTGCAAGTTCACC | 55 | 772 | Â |
TaDMC1- DGSP4 | GGAAGACCCAGTTGGCTCAT | 55 | 461 | Â |
TaDMC1- DGSP5 | GGTGAACTTGCAGAGCGTCAG | 55 | 207 | Â |
TaRAD51 Exon 8-F | CCATGATGGTGGAGACAAGG | 65 | 2500 | Amplification of intronic regions in TaRAD51 &TaDMC1 genes |
TaRAD51 3'UTR-R | TGGTGGTCCAATATCACATAGGAG | Â | Â | Â |
TaDMC1-5'UTR-F | ATGATCCACATTCCACCCGC | 65 | 2500 | Â |
TaDMC1-Exon 6-R | ATGAGCCAACTGGGTCTTCC | Â | Â | Â |
iTaRAD51-7A&7D-F | CGGAAGGATTGGTA AAAAAT | 55 | 450 & 500 | TaRAD51 &TaDMC1 genome-specific primers based on intronic regions for localization on wheat genome |
iTaRAD51-7A&7D-R | CACTCAGAAATGACG AAAAAGG | Â | Â | Â |
iTaRAD51-7B-F | ATGGTGGAGACAA GGTGAG | 63 | 500 | Â |
iTaRAD51-7B-R | GTACACTAGCATTAC GGTACAG | Â | Â | Â |
iTaDMC1-5A-F | AGCCTCCGCCCCACTTCCTTC | 63 | 500 | Â |
iTaDMC1-5A-R | ACAAACGCAACACGA GCACACG | Â | Â | Â |
iTaDMC1-5B-F | AGCCTTGGCCCCACTTCCTC | 63 | 500 | Â |
iTaDMC1-5B-R | ACGCGCTGCACGCA CCAAA | Â | Â | Â |
iTaDMC1-5D-F | CTCCTCTGACGCAG GCGGA | 63 | 389 | Â |
iTaDMC1-5D-R | ACGCGCTGCACGC ACCAAA | Â | Â | Â |
TaRAD51-UTR-F | CCTCACATCCCGAGCATCTC | 63 | 1528 | TaRAD51 cDNA full-length primers including UTR's |
TaRAD51-UTR-R | CTCCTATGTGATATTGGACCACCA | Â | Â | Â |
eTaRAD51-7A-F | GGGGATACCTCGTGTATCAGACT | 58 | 328 | TaRAD51 genome-specific primers based on exons for QRT-PCR analyses |
eTaRAD51-R | TGGTGGTCCAATATCACATAGGAG | Â | Â | Â |
eTaRAD51-7B-F | GATACATCGTGTATCGGACA | 58 | 328 | Â |
eTaRAD51- R | TGGTGGTCCAATATCACATAGGAG | Â | Â | Â |
eTaRAD51-7D-F | TGGGGATACATCGTGTATTGGCCT | 65 | 327 | Â |
eTaRAD51- R | TGGTGGTCCAATATCACATAGGAG | Â | Â | Â |
TaDMC1-UTR-F | ATGATCCACATTCCACCCGC | 63 | 1268 | TaDMC1 cDNA full-length primers including UTR's |
TaDMC1-UTR-R | CACTGCAGAAAAGAAATTGGGCAAC | Â | Â | Â |
eTaDMC1-5A-F | AGCCTCCGCCCCACTTCCTTC | 65 | 150 | TaDMC1 genome-specific primers based on exons QRT-PCR analyses |
eTaDMC1-R | CTTGTCGATGGACTCGAAGCACTC | Â | Â | Â |
eTaDMC1-5B-F | AGCCTTGGCCCCACTTC CTC | 65 | 150 | Â |
eTaDMC1-R | CTTGTCGATGGACTCGAAGCACTC | Â | Â | Â |
eTaDMC1-5D-F | TTCTCCTCCAGCAGCACGCGAA | 65 | 150 | Â |
eTaDMC1-R | CTTGTCGATGGACTCGAAGCACTC | Â | Â | Â |
TUB-F | TCTTCATGGTGGGCTTCGC | 55 | 475 | QRT-PCR control primers |
TUB-R | CGCCTCGGGTGAACTCCATCT | Â | Â | Â |