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Table 2 Parameters of intra- and intergroup genetic diversity among the five populations of J. curcas

From: Developmenrt of EST-SSR and genomic-SSR markers to assess genetic diversity in Jatropha Curcas L.

Population

n

#loc_P

PLP (%)

na

ne

H

I

Indonesia

9

118

54.63

1.7541

1.5769

0.3140

0.4526

Grenada

9

100

46.30

1.6995

1.5046

0.2818

0.4099

South America

9

147

68.06

1.8907

1.5763

0.3326

0.4920

Yunnan, China

9

108

50.00

1.8361

1.6274

0.3473

0.5022

Hainan, China

9

148

68.52

1.8142

1.4575

0.2785

0.4221

Total

45

183

84.72

2.0000

1.6869

0.3819

0.5572

St. Dev

-

-

-

± 0.0000

± 0.3107

± 0.1403

± 0.1741

    

Ht

Hs

Gst

Nm

Mean

   

0.3819

0.3108

0.1861

2.1868

St. Dev

   

± 0.0197

± 0.0158

  
  1. n = number of genotypes per sample;
  2. #loc P = number of polymorphic loci;
  3. PLP = percentage of polymorphic loci;
  4. na = observed number of alleles;
  5. ne = effective number of alleles [Kimura and Crow (1964)];
  6. h = Nei's (1973) gene diversity;
  7. I = average genetic diversity index;
  8. Ht = total gene diversity;
  9. Hs = intrapopulation gene diversity;
  10. Gst = coefficient of gene differentiation;
  11. Nm = estimate of gene flow from Gst; Nm = 0.5 (1-Gst)/Gst
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BMC Research Notes

ISSN: 1756-0500

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