Skip to main content

Table 2 Contigs with high read number in the Atta laevigata cDNA library.

From: Expressed sequence tags from Atta laevigata and identification of candidate genes for the control of pest leaf-cutting ants

Contig Reads Rate* Best hit (organism) Function+
311 123 76.9 COX I (Myrmica rubra) 1
235 52 32.5 Similar to paramyosin CG5939-PA (Apis mellifera) 2
183 47 29.4 ATP synthase F0 subunit 6 (Camponotus sayi) 1
037 43 26.9 COX III (Bombyx mandarina) 1
294 40 25.0 Similar to muscle protein 20 CG4696-PA (Apis mellifera) 2
056 30 18.8 COX II (Atta colombica) 1
330 30 18.8 Actin-5 (Bactrocera dorsalis) 2
289 25 15.6 Similar to limpet CG32171-PD (Apis mellifera) 3
337 20 12.5 Muscle LIM protein (Nasonia vitripennis) 3
273 19 11.9 Cytochrome b (Formica pratensis) 1
268 14 8.8 Similar to muscle LIM protein at 84B (Apis mellifera) 3
046 14 8.8 Similar to CG5023-PA (Apis mellifera) 3
015 13 8.1 Troponin I (Apis mellifera) 2
116 12 7.5 Similar to muscle LIM protein at 84B (Apis mellifera) 3
069 11 6.9 NADH dehydrogenase subunit 4 (Harpiosquilla harpax) 1
328 10 6.3 AGAP005400-PA (Anopheles gambiae) 3
  1. * Number of reads divided per 1.6 which is the mean number of reads (3,203) per US (2,006).
  2. +1. ATP synthesis coupled to redox reactions in mitochondria (273 reads). 2. Muscle or cytoskeleton structure (135 reads). 3. Transcription regulatory processes through homeobox or signaling proteins (95 reads).