Table 1 Identified polymorphisms in porcine TFRC, ACK1, MUC4, MUC20 and KIAA0226 genes
From: Characterisation of five candidate genes within the ETEC F4ab/ac candidate region in pigs
Gene | No. | Base | Consequence |
|---|---|---|---|
TFRC (100.8 Mb) | 1 | G→A (E4) | Ala→Thr |
2 | T→C (E10) | Silent | |
3 | G→T (I11) | 10 bp before branch point | |
ACK1 (100.9 Mb) | 4 | C→G (E1) | Pro→Ala |
5 | T→C (E2) | Silent | |
6 | G→T (E2) | Silent | |
7 | C→T (E3) | Silent | |
8 | A→C (E7) | Silent | |
9 | C→T (E7) | Silent | |
10 | T→C (E9) | Silent | |
11 | C→T (E9) | Silent | |
12 | G→A (E10) | Silent | |
13 | C→A (E12) | Pro→His | |
14 | A→G (E12) | Silent | |
15 | G→A (E12) | Silent | |
16 | G→A (E12) | Val→Met | |
17 | A→G (E12) | Silent | |
18 | G→A (E12) | Arg→His | |
19 | G→C (E12) | Ser→Thr | |
20 | C→G (I14) | 5 bases before exon 15 | |
MUC4 (101.0 Mb) | 21 | C→A (E12) | Silent |
22 | C→T (I13) | 4 bases before exon 14 | |
23 | C→T (I13) | 16 bases before exon 14 | |
24 | C→T (I13) | 28 bases before exon 14 | |
25 | C→T (E19) | Silent | |
26 | G→A (E24) | Gly→Ser | |
27 | T→C (E24) | Silent | |
28 | G→A (3UTR) | 187 bases after TGA | |
29 | G→A (3UTR) | 259 bases after TGA | |
MUC20 (101.1 Mb) | 30 | A→C (3UTR) | 201 bases after TGA |
31 | C→T (I2) | 58 bases after exon 2 | |
32 | C→T (E2) | Silent | |
33 | A→T (E1) | Silent | |
KIAA0226 (101.1 Mb) | 34 | C→T (E20) | Silent |