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Figure 2 | BMC Research Notes

Figure 2

From: Protein sequence alignment with family-specific amino acid similarity matrices

Figure 2

The scatter plot of the average difference in the alignment quality score between the family-specific matrices and the VTML200 matrix. Each dot represents one group from the SUP subset. A positive value of the average difference indicates that the family-specific similarity matrix performs better than VTML200. The Pearson's correlation coefficient calculated using the data points from this plot is 0 (no correlation).

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