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Table 1 The list of gene name annotated by Gene Ontology based on the homologous protein entries in the public databases

From: Comparison of RNA expression profiles on generations of Porphyra yezoensis (Rhodophyta), based on suppression subtractive hybridization (SSH)

Gene symbol Full Name vegetative cells carpospores
NeoTet pNeo4 NeoTet  
fglh1 lysyl hydroxylase 1  
response regulator response regulator  
sensor histidine kinase sensor histidine kinase  
Peb1 response regulator Rr1 genes  
rr1 response regulator Rr1  
  sigma-54 DNA-binding response regulator  
  sigma 54 modulation protein  
RPL41 ribosomal protein L41
RPL27A ribosomal protein L27A  
RPL30 ribosomal protein L30  
RPL23a ribosomal protein L23a  
RPL9 ribosomal protein L9
RPS3 ribosomal protein S3  
RPS11 ribosomal protein S11
EEF1A1 eukaryotic translation elongation factor 1 alpha 1  
RSIP ribosomal subunit interface protein  
GTP1/OBG family translation-associated GTPase  
RNA helicase DEAD-box ATP dependent DNA helicase  
Snf2 family protein Snf2 family protein-related Helicase  
tRNA synthase tRNA pseudouridine synthase  
RecQ ATP-dependent DNA helicase RecQ  
MutT putative mutator protein  
NUDIX hydrolase MutT/nudix family protein  
uvrA excinuclease ABC, subunit A  
integrase Transposase from transposon Tn916  
  DNA-directed RNA polymerase subunit  
recF recombination protein F  
RadA DNA repair protein  
hsdM type I restriction enzyme M protein  
RE restriction endonuclease  
GidA tRNA uridine 5-carboxymethylaminomethyl
modification enzyme
GidA glucose-inhibited division protein A  
fruA/fruB frutan hydrolase (fruA), FruB (fruB)  
ek435 cyplasin S  
hsp68 heat shock protein 68  
hrcA repressor of heat shock gene expression HrcA  
dnaK molecular chaperone DnaK  
grpE molecular chaperone  
PUM1 pumilio 1  
CYTH2 cytohesin 2  
CBX7 protein binding  
PSCD2 pleckstrin homology, Sec7 and coiled domains 2  
Acac nucleolin-related protein, transcript variant  
INHBA inhibin beta A  
RBM9 RNA binding motif protein 9  
SLC25A5L solute carrier family 25  
PAX1 paired box gene 1  
g6pd glucose-6-phosphate-1-dehydrogenase  
thiol peroxidase thiol peroxidase  
SOD1 superoxide dismutase 1  
BTG1 B-cell translocation gene 1, anti-proliferative  
aab aromatic amino acid biosynthetic gene cluster  
Ndfip1 Nedd4 family interacting protein 1  
RGS7 regulator of G-protein signalling 7  
LAPTM4A lysosomal-associated protein transmembrane 4α  
ABC transporter putative osmoprotectant ABC transporter
nitrite transporter nitrite transporter  
p76 Transmembrane 9 superfamily
member 2 precursor
IBP iron-binding protein genes  
EF2015 minor head protein  
HAD HAD superfamily hydrolase  
methyltransferase putative methyltransferase  
carboxylesterase carboxylesterase  
Gfo/Idh/MocA family oxidoreductase  
SEPHCHC synthase carboxylic acid synthase  
PTS system phosphotransferase system  
SAG0894 family CRISPR associated protein  
SecY preprotein translocase subunit SecY  
signal peptidase I signal peptidase I  
clpC stress response-related Clp protease  
NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha  
ATP citrate synthase ATP citrate synthase  
ATP citrate lyase ATP citrate lyase  
atpA/B/C/D/E/F/G/H H+ ATPase subunits  
COX4I1 cytochrome c oxidase subunit IV isoform 1  
pykF pyruvate kinase  
Rmet_0948 ubiquinol oxidase, subunit II  
FH fumarate hydratase  
ADPGlc Ppase Glucose-1-phosphate adenylyltransferase  
glycerol dehydrogenase glycerol dehydrogenase  
dapB dihydrodipicolinate reductase  
cmk Cytidine monophosphate kinase  
arcABCRD arginine deiminase operon  
argR1/argR2 arginine repressors  
NGLY1 N-glycanase 1  
prs phosphoribosyl pyrophosphate synthetase  
ldh L-lactate dehydrogenase  
gcaD UDP-N-acetylglucosamine pyrophosphorylase  
ghfp glycosy hydrolase family protein  
EF2591 glyoxalase family protein  
adk adenylate kinase(AK)  
YgfK pyridine nucleotide-disulfide family  
ApbE thiamin biosynthesis ApbE  
IPP isomerase phosphomevalonate kinase  
Gelsolin precursor Gelsolin precursor  
IVNS1ABP influenza virus NS1A binding protein  
holin holin  
psbO1 oxygen-evolving enhancer 1 precursor  
PBP 1B membrane carboxypeptidase  
MDRP multidrug resistance protein  
MFSP major facilitator superfamily protein