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Table 1 Selected candidate reference genes, primers, and PCR reactions efficiencies

From: Age-related changes in relative expression stability of commonly used housekeeping genes in selected porcine tissues

Gene name

GeneBank accession number

Primer sequence (forward/reverse)

Amplicon length (bp)

Amplification efficiency (%)

R2

Average Ct of cDNA

      

1 Day

2 months

5 months

B2M

NM_213978.1

ACTTTTCACACCGCTCCAGT CGGATGGAACCCAGATACAT

180

86.83

0.999

20.23

19.24

20.63

BLM

NM_001123084.1

TCCTCACCTTCTGCATTTCC GTGGTGGCTGAGAATCCTGT

152

95.94

0.995

25.29

24.12

24.89

GAPDH

AF017079.1

ACCCAGAAGACTGTGGATGG ACGCCTGCTTCACCACCTTC

247

95.95

0.991

26.82

26.22

26.29

HPRT1

NM_001032376.2

AACCTTGCTTTCCTTGGTCA TCAAGGGCATAGCCTACCAC

150

81.88

0.997

22.27

21.28

22.29

PPIA

NM_214353.1

CACAAACGGTTCCCAGTTTT TGTCCACAGTCAGCAATGGT

171

82.96

0.995

16.82

16.31

17.61

RPL4

DQ845176.1

AGGAGGCTGTTCTGCTTCTG TCCAGGGATGTTTCTGAAGG

185

91.07

0.995

16.65

16.80

17.32

SDHA

DQ178128.1

AGAGCCTCAAGTTCGGGAAG CAGGAGATCCAAGGCAAAAT

149

86.41

0.989

20.55

20.64

22.34

TBP

DQ178129.1

ACGTTCGGTTTAGGTTGCAG GCAGCACAGTACGAGCAACT

118

99.59

0.995

24.44

23.92

24.31

YWHAZ

DQ178130.1

ATTGGGTCTGGCCCTTAACT GCGTGCTGTCTTTGTATGACTC

146

93.83

0.997

20.35

19.64

19.92

  1. *R2, correlation coefficient of the slope of the standard curve