From: Cyclic stretch increases splicing noise rate in cultured human fibroblasts
Name | Exon | Sequence 5'-3' | P | AT |
---|---|---|---|---|
AATF S3 H | 2-4 | CCAGGATCGTCTGCACTG | 96 | 59.5 |
AATF S3 R | 4 | AACATCTGGTTGAGGAAGCTG | 96 | 59.5 |
AATF WT H | 2 | GACACGGACAAAAGGTATTGC | 122 | 59.5 |
AATF WT R | 3 | TCTCCAGACCCTTCCTCATC | 122 | 59.5 |
MAP3K11 S9 H1 | 8-10 | CCAGCACTCAATGGAGGC | 149 | 59.5 |
MAP3K11 S9 R | 10 | AAGCTCCAGGGATCAATGC | 149 | 59.5 |
MAP3K11 WT H | 7 | GGAGGACTCAAGCAATGGAG | 120 | 59.5 |
MAP3K11 WT R | 8 | AGGTACCATGTGGCTTCGTC | 120 | 59.5 |
NF1 S38 H | 37-39 | AGACACCAAAGTTTCTATTAAAGTCAGCT | 62 | 60 |
NF1 S38 R | 39 | GGTACAAGTTAAGGCACACAGAAGATTA | 62 | 60 |
NF1 S39 H | 38-40 | TCTGACCCGAGTTTACGGTATTG | 72 | 60 |
NF1 S39 R | 40 | AGATTTGACAGCCATGGAGTCAT | 72 | 60 |
NF1 WT H | 38 | GCAGTTCTGACCCGAGTTTACG | 99 | 60 |
NF1 WT R | 39 | ATGTCTCTAGTAACTGGCCCTCGAT | 99 | 60 |
PCGF2 S10 H1 | 9-11 | CCCAGCAAGTACAAGAACGG | 139 | 60 |
PCGF2 S10 R1 | 11 | CGCTGACTGACTCACACTCG | 139 | 60 |
PCGF2 WT H | 9 | AAGTTTCTCCGCAACAAGATG | 100 | 60 |
PCGF2 WT R | 10 | CGATGTCCATGAGGGTGTAG | 100 | 60 |
POLR2A S23 H | 22-24 | GAGAACAAGATGCAAGAGGTGTAC | 88 | 59.5 |
POLR2A S23 R | 24 | CCTTGAATTCCCCATCCTC | 88 | 59.5 |
POLR2A WT H | 22 | GTTTTGGTGACGACTTGAACTG | 145 | 59.5 |
POLR2A WT R | 23 | CGCAGGAAGACATCATCATC | 145 | 59.5 |
RABAC1 S4 H | 3 | CGTCCCCTATGTTGCTGGTG | 107 | 63 |
RABAC1 S4 R2 | 3-5 | CACCAGGGTGGCTCCAAAG | 107 | 63 |
RABAC1 WT H1 | 2 | GCAACTATGTGTTCGTGTTCCTG | 148 | 61 |
RABAC1 WT R1 | 3-4 | TCTCGGCCAAAGAGCACA | 148 | 61 |