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Table 2 Overall summary of the performance of the models

From: Predictive models for anti-tubercular molecules using machine learning on high-throughput biological screening datasets

Dataset

Classifier*

TP%

FP%

TN%

FN%

Accuracy

ROC area

BCR #

MCC $

AID1626

CSCNB

44.4

19.3

80.7

55.6

80.32%

0.707

0.625

0.061

 

CSCRF

65.7

17.5

82.5

34.3

82.36%

0.823

0.741

0.122

 

CSCSMO

51.2

18.8

81.2

48.8

80.88%

0.750

0.662

0.080

 

MetaCostJ48

59.3

19.6

80.4

40.7

80.24%

0.690

0.698

0.097

AID1949

CSCNB

46.9

19.4

80.6

53.1

80.04%

0.712

0.637

0.080

 

CSCRF

69.2

18.5

81.5

30.8

81.25%

0.825

0.753

0.162

 

CSCSMO

54.1

19.9

80.1

45.9

79.63%

0.744

0.671

0.107

 

MetaCostJ48

61.6

18.5

81.5

38.4

81.17%

0.718

0.715

0.138

AID1332

NB

39.4

19.5

80.5

60.6

74.31%

0.686

0.599

0.171

 

CSCRF

81.8

17.3

82.7

18.2

82.57%

0.876

0.822

0.521

 

CSCSMO

72.7

16.2

83.8

27.3

82.11%

0.806

0.782

0.469

 

MetaCostJ48

72.7

17.3

82.7

27.3

81.19%

0.762

0.777

0.454

  1. * CSC denotes CostSensitiveClassifier, # BCR - Balanced Classification Rate,
  2. $ MCC - Matthews Correlation Coefficient