Table 1 List of the top 50 targets ranked by total fold change following a strain by strain comparison after microarray based differential expression analysis for the following three data sets
Position | E12.5 entire embryo/4 strains | E12.5 eviscerated embryos/4 strains | E12.5 eviscerated embryos/11 strains |
|---|---|---|---|
1 | LOC382555 | Tm7sf3 | Tm7sf3 |
2 | Gramd4 | Fcer1g | Fcer1g |
3 | Sspn | LOC100041516 | C920006O11Rik |
4 | LOC666403 | Pou6f1 | Lrrc57 |
5 | EG384179 | C920006O11Rik | scl0001602.1_506 |
6 | Tmem87a | Smad2 | LOC100041516 |
7 | Cap1 | Lrrc57 | Pou6f1 |
8 | C920006O11Rik | Mod1 | Sspn |
9 | Lrrc57 | Sspn | LOC382555 |
10 | Fcer1g | Ctse | Mod1 |
11 | Ctse | Map3k4 | Smad2 |
12 | Lip1 | Gmfb | Thumpd1 |
13 | Eif2s3y | AA388235 | Myl2 |
14 | 6230403H02Rik | LOC382555 | OTTMUSG00000010673 |
15 | 2810417H13Rik | Tmem87a | AA388235 |
16 | Prkag2 | Crygd | Tmem87a |
17 | Pdrg1 | 6230403H02Rik | Map3k4 |
18 | B230312I18Rik | 9430065F12Rik | LOC641366 |
19 | Tm7sf3 | LOC641366 | Gmfb |
20 | Atrnl1 | LOC100043918 | Klk1b22 |
21 | Pou6f1 | Klk1b22 | 2610203C20Rik |
22 | Cbwd1 | D930007N19Rik | 9430065F12Rik |
23 | Plk1 | B230213E18Rik | Ctse |
24 | Drbp1 | Cfl1 | Bat5 |
25 | LOC100041516 | LOC229810 | EG631624 |
26 | Paip1 | 1700001E04Rik | Bag2 |
27 | Ube2i | Cryaa | 3110099E03Rik |
28 | Itga9 | EG631624 | LOC229810 |
29 | 2310002F18Rik | Crygb | 3110007F17Rik |
30 | Snx5 | 2600001B17Rik | 6230403H02Rik |
31 | Rusc2 | D330027H18Rik | 6720422M22Rik |
32 | 2810410P22Rik | BC032265 | 2600001B17Rik |
33 | Csrp1 | 3110003A22Rik | Rbm45 |
34 | Zfp330 | Cap1 | 3110003A22Rik |
35 | C920004C08Rik | Cryga | Usp25 |
36 | 1110005F07Rik | A630064P09Rik | Apol7c |
37 | LOC229810 | Usp25 | LOC100044289 |
38 | EG666668 | LOC100044289 | Cryaa |
39 | Zcchc3 | LOC100040657 | B230213E18Rik |
40 | 3110040M04Rik | LOC622901 | LOC384154 |
41 | Ttc27 | 2610203C20Rik | D330027H18Rik |
42 | Cops8 | 3110099E03Rik | Zfp35 |
43 | Aph1b | Gramd4 | EG384179 |
44 | Prcp | LOC100048169 | Cap1 |
45 | Mff | LOC100044150 | 4930488E11Rik |
46 | Slc25a17 | Serpina3h | Ccdc109b |
47 | Tor1aip2 | 6720422M22Rik | Rnf20 |
48 | Adamts9 | C130082I06Rik | Crygd |
49 | 6720422M22Rik | EG384179 | LOC666661 |
50 | Lrp6 | Rbm45 | 1700001E04Rik |