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Table 5 Comparison of Arapan-S with all QSRA, Minimus and Mira assemblers on Antelope coronavirus US/OH1/2003 genome

From: Arapan-S: a fast and highly accurate whole-genome assembly software for viruses and small genomes

Species Assembler Contigs ≥ 400 bp Total Length Mean size (bp) N50 (bp) Largest contig (bp) Genome coverage
Antelope coronavirus US/OH1/2003 Arapan-S 1 26280 26280 26280 26280 98.89
  QSRA 0 0 0 0 0 0
  Minimus 1 30994 30994 30994 30994 116.63
  Mira 5 33793 6758.6 31042 31042 116.81
  1. Only contigs whose lengths ≥ 400 were selected.