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Table 3 Atypical R-domain combinations found in the UniGene PRGdb dataset

From: In silico approach to predict candidate R proteins and to define their domain architecture

Unigene ID Resistance Class Aty-R domain(s) Species
At.43365 NBS-LRR-AtyR Mob1 Arabidopsis thaliana
Os.24417 NBS-LRR-AtyR Zinc finger, ZZ-type Oryza sativa
Os.25168 NBS-AtyR GTPase Containing Family Oryza sativa
Os.25222 NBS-AtyR Phosphatase 2C Oryza sativa
Os.25268 NBS-AtyR WRKY transcription factor; Gag-Pol-related Retrotransposon Oryza sativa
Os.27097 NBS-AtyR WRKY transcription factor Oryza sativa
Os.78619 NBS-AtyR Zinc finger, CCHC-type Oryza sativa
Os.79969 NBS-AtyR DUF1979 Oryza sativa
Os.93921 NBS-AtyR Cecropin; Origin replication binding protein Oryza sativa
Pth.15498 NBS-AtyR Gag-Pol-related Retrotransposon Populus trichocarpa
Pth.15636 NBS-AtyR Zinc finger, BED-type Populus trichocarpa
At.3076 TIR-LRR-NBS-KIN-Serthr-AtyR Phenylalanine Hydroxylase (PAH); WRKY transcription factor Arabidopsis thaliana
At.38115 TIR-AtyR DUF541 Arabidopsis thaliana
At.51652 TIR-AtyR Toll-IL-1 receptor domain-containing adapter protein (TIRAP) Arabidopsis thaliana
Ghi.9199 TIR-AtyR Toll-IL-1 receptor domain-containing adapter protein (TIRAP) Gossypium hirsutum
Gma.3221 TIR-AtyR Helix-loop-helix structural domain ( EF-HAND 2) Glycine max
Vvi.2456 TIR-AtyR Toll-IL-1 receptor domain-containing adapter protein (TIRAP) Vitis vinifera
At.46853 TNL-AtyR Pleckstrin homology domain (PH); Regulator of chromosome condensation Arabidopsis thaliana
Pth.16040 TNL-AtyR CALCINEURIN B Populus trichocarpa
Pth.16041 TNL-AtyR DNA-Directed RNA Polymerase II Populus trichocarpa
Pth.16058 TNL-AtyR Gag-Pol-related Retrotransposon Populus trichocarpa
Han.34 TIR-NBS-AtyR Steroid Binding Protein Helianthus annuus
Psi.4721 TIR-NBS-AtyR Toll-IL-1 receptor domain-containing adapter protein (TIRAP) Picea sitchensis
  1. Sequences are divided according to the R domain and sorted by species.