Table 10 Alignment statistics of reads mapped against Flaviviridae genomes
From: False positives complicate ancient pathogen identifications using high-throughput shotgun sequencing
Platform | Sample Description | Reads Mapped (% Mapped) | Molecular Length (bp) | Total Mapped (bp) |
|---|---|---|---|---|
HeliScope | Grand Plaza Bulk 1 | 93 (0.00%) | 24.6 ± 0.8 | 2,284 |
Grand Plaza Bulk 2 | 111 (0.00%) | 24.6 ± 0.9 | 2,726 | |
Grand Plaza Phos. 1 | 112 (0.00%) | 24.7 ± 0.9 | 2,762 | |
Grand Plaza Phos. 2 | 76 (0.00%) | 24.8 ± 1.0 | 1,881 | |
Churchyard Bulk 1 | 122 (0.00%) | 24.6 ± 1.3 | 3,004 | |
Churchyard Bulk 2 | 126 (0.00%) | 24.7 ± 1.1 | 3,116 | |
Churchyard Phos. 1 | 106 (0.00%) | 24.5 ± 0.8 | 2,602 | |
Churchyard Phos. 2 | 105 (0.00%) | 24.5 ± 0.8 | 2,573 | |
Grand Plaza Sheared | 0 (0.00%) | — | 0 | |
Churchyard Sheared | 0 (0.00%) | — | 0 | |
Soil Bulk | 3 (0.00%) | 24.3 ± 0.6 | 73 | |
Soil Sheared | 0 (0.00%) | — | 0 | |
HiSeq 2500 | TP04 | 0 (0.00%) | — | 0 |
TP09 | 0 (0.00%) | — | 0 | |
TP10 | 0 (0.00%) | — | 0 | |
TP18 | 0 (0.00%) | — | 0 | |
TP37 | 0 (0.00%) | — | 0 | |
TP48 | 0 (0.00%) | — | 0 | |
Soil Bulk | 0 (0.00%) | — | 0 |