Figure 3

Information profiles of original and simulated DNA sequences. The first plot shows 10 Mbp of a regular DNA FASTQ sequence. The rest, also with 10 Mbp, are simulated sequences, respectively, with 0, 10 and 350 repeats, and 350 reverse complemented repeats (repeats minimum size: 1, maximum size: 3000, mutation rate: 0.1). All information profiles have been computed with an encoder based on multiple Markov models and filtered with a window size of 5, from left to right.