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Table 1 FISH mapping of 1p21-22 amplicon

From: Mapping of the chromosomal amplification 1p21-22 in bladder cancer

Clones Chromosome location Cell lines    
   SCaBER HT-1376 UM-UC-3 TCCSUP RT4 J82 T24 5637
RP11-82E1 91,116,728–91,294,152 3/4 (0.9)        3/3 (1.00)
RP5-865 M20 92,068,692–92,181,253 2/4 (0.54) 10/6 (1,53)   3/4 (0.86) 4/4 (0.98) 3/3 (1.00) 3/3 (1.17) 3/3 (1.00)
RP4-621B10 92,517,154–92,659,879 2/4 (0.54) 10/6 (1.89)   3/4 (0.86) 4/4 (1.00) 3/3 (1.00) 3/3 (1.12) 3/3 (1.00)
RP5-1014C4 92,854,755–93,007,879 7/4 (2.02) 11/6 (1.91) 4/4 (1.02)      3/3 (1.00)
RP11-977E2 93,042,494–93,249,510 8/4 (2.35) 10/6 (1.65) 3/4 (0.75) 3/4 (0.73) 4/4 (0.93) 3/3 (0.86) 4/3 (1.24) 3/3 (1.00)
RP5-976O13 93,529,940–93,632,330 10/4 (3.07) 10/6 (1.64)   3/4 (0.78)   3/3 (1.06)   3/3 (1.00)
RP4-713B5 93,760,493–93,865,044 11/4 (3.02) 10/6 (1.83)       3/3 (1.00)
RP11-272P3 94,980,681–95,180,686 3/4 (0.99) 11/6 (1.91)       3/3 (1.00)
RP11-146P11 95,983,612–96,156,674 4/4 (1.04) 10/6 (1.85) 4/4 (1.05) 3/4 (0.82) 4/4 (1.05) 3/3 (0.93)   3/3 (1.00)
RP11-122C9 97,095,507–97,282,884 3/4 (1.07) 10/6 (1.91)       3/3 (1.00)
  1. The first value represents the median of signals from the locus-specific probe indicated under ‘clones’; the second value represents the median number of signal from the chromosome 1 centromeric probe. The ratio between the two values is bracketed. SCaBER cell line shows a high level amplification between the positions 92,854,755 and 93,865,044 (GRCh37/h19), whereas HT-1376 cell line shows a copy-number gain.