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Table 2 Quality processing of reads from three Hevea tissue libraries

From: RNA sequencing read depth requirement for optimal transcriptome coverage in Hevea brasiliensis

Latex library Read number (forward + reverse) Read size (forward + reverse)
Raw reads 50,384,572 (100%) 5,038,457,200 (100%)
Clean reads 49,393,389 (98.03%) 4,709,104,798 (93.46%)
Paired reads 48,650,932 (96.56%) 4,647,858,661 (92.25%)
Orphan reads (single end) 742,457 (1.47%) 61,246,137 (1.21%)
Leaf library Read number (forward + reverse) Read size (forward + reverse)
Raw reads 49,578,322 (100%) 4,957,832,200 (100%)
Clean reads 47,662,360 (96.14%) 4,512,413,782 (91.02%)
Paired reads 46,062,766 (92.90%) 4,373,106,379 (88.21%)
Orphan reads (single end) 1,599,594 (3.23%) 139,307,403 (2.81%)
Bark library Read number (forward + reverse) Read size (forward + reverse)
Raw reads 169,887,626 (100%) 16,988,762,600 (100%)
Clean reads 166,258,828 (97.86%) 15,983,753,737 (94.08%)
Paired reads 163,316,702 (96.13%) 15,726,859,825 (92.57%)
Orphan reads (single end) 2,942,126 (1.73%) 256,893,912 (1.51%)