Table 1 Characterization of the polymorphic microsatellite loci identified in Euphausia superba
From: Characterization of polymorphic microsatellite loci in the Antarctic krill Euphausia superba
Locus | Repeat motif | Primer sequence (5′-3′) | Ta(°C) | Allele size range (bp) | A | H O | H E | F IS |
|---|---|---|---|---|---|---|---|---|
Esup1 | (TGTA)10 | F: TGTTTGGGTACTCACGGTCG | 58 | 141-188 | 12 | 0.90 | 0.89 | −0.006 |
R: ACGTACATCCTCAGACAGAC | ||||||||
Esup2 | (TAG)7 | F: ACCATAACCTCACTGACACC | 57 | 103-125 | 5 | 0.36 | 0.37 | 0.053 |
R: ATGGTAAGGTTGCACTGGAC | ||||||||
Esup3 | (GT)11 | F: CGCATGATTGCATCGCAAAG | 56 | 183-205 | 12 | 0.84 | 0.86 | 0.029 |
R: AGGCACTCTCTGTCTCACTC | ||||||||
Esup4 | (AC)14 | F: AATTTGAGAAAGCATAATACACTGAC | 52 | 185-221 | 15 | 0.84 | 0.89 | 0.057 |
R: TGTGTTTGTTGTGCATGTTTGAG | ||||||||
Esup5 | (GTA)7 | F: CCAGTACCAACACTAGCACC | 50 | 147-165 | 7 | 0.84 | 0.74 | −0.14 |
R: GCTGCACTCATTCCATCCAC | ||||||||
Esup6 | (TTG)7 | F: CTATGGCGCCCACAAATTCC | 50 | 215-279 | 17 | 0.77 | 0.92 | 0.157 |
R: ACAACAGCAAGAGCATCCAC | ||||||||
Esup7 | (AG)13 | F:TGCATAGATGTACAAAGAGATAGC | 55 | 110-138 | 14 | 0.87 | 0.90 | 0.038 |
R: ATATCCGCATCGGCAAACAC | ||||||||
Esup8 | (TG)16 | F: GCATCAGGCTATGTTGAGGG | 58 | 117-143 | 14 | 0.74 | 0.81 | 0.086 |
R: TGAATCACATGCCAATACACAC | ||||||||
Esup9 | (TG)12 | F:TTCTGGTGCCTATGAAGGGG | 58 | 180-270 | 28 | 0.81 | 0.96 | 0.167 |
R: TGCTCAATGAAATATGCAATAAAGAC | ||||||||
Esup10 | (TATC)9 | F: AGCGCTATAATATCAAAAATACAACC | 54 | 216-282 | 17 | 0.87 | 0.93 | 0.066 |
R: AGAAAGTCCCTTTTTGCACG |