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Table 8 True positive (TP) and true negative (TN) rates for reference values of target distance BT when predicted by AF, for E. coli

From: Next generation sequencing reads comparison with an alignment-free distance

Set used for 0.105 0.15 0.205 0.25
training the predictor TP [%] TN [%] TP [%] TN [%] TP [%] TN [%] TP [%] TN [%]
EA 97.00 99.09 96.38 98.78 95.43 98.66 94.61 98.60
EB 99.08 98.14 98.90 97.43 98.54 96.92 97.97 96.78
EC 100.00 96.11 99.98 94.75 99.98 93.48 99.96 92.56
ED 98.67 98.47 98.30 97.93 97.95 97.49 97.49 97.21
EE 98.31 98.69 97.42 98.39 97.15 97.97 96.57 97.84
EF 95.46 99.45 94.15 99.35 93.46 99.19 91.43 99.35
Average 98.09 98.32 97.52 97.77 97.09 97.29 96.34 97.06
  1. Predictor is trained on one set and tested over the other 5 sets.