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Table 2 Analysis of putative rhomboid proteases from nine sequenced Streptomycetes

From: Evolutionary dynamics of rhomboid proteases in Streptomycetes

IMG Gene_OID

Species

Length (aa)a

Family

ASb

AS distance (aa)

aa in TMHc

# TMH

pfam e value

29607986

S. avermitilis

298

A

249, 203

46

130.58

6

2.50E−34

297158806

S. bingchenggensis

295

A

245, 199

46

132.73

6

2.10E−35

337767090

S. cattleya

282

A

232, 185

47

141.11

7

1.20E−34

259419993

S. coelicolor ( SCO3855 )

297

A

248, 202

46

138.3

7

3.30E−37

178466026

S. griseus subsp. griseus

208

A

236, 190

46

136.70

7

4.50E−35

374101595

S. hygroscopicus jinggangensis

281

A

232, 186

46

121.77

6

2.60E−36

297193265

S. pristinaespiralis

299

A

249, 203

46

136.04

7

2.90E−37

260648514

S. scabiei

297

A

248, 201

47

135.09

7

1.70E−38

297200957

S. sviceus

294

A

245, 199

46

130.14

7

8.60E−36

29609854

S. avermitilis

321

B

270, 223

47

135.72

7

3.80E−27

24419018

S. coelicolor ( SCO2023 )

285

B

229, 182

47

139.55

7

9.70E−24

178467794

S. griseus subsp. griseus

303

B

251, 204

47

131.42

6

1.20E–28

260650743

S. scabiei

309

B

258, 211

47

133.61

7

8.40E–26

197711076

S. sviceus

305

B

252, 205

47

138.69

7

1.10E–26

29605874

S. avermitilis

272

C

235, 169

66

128.22

6

1.70E–36

337763630

S. cattleya

266

C

235, 169

66

126.73

6

6.10E–35

21224370

S. coelicolor ( SCO6038 )

285

C

346, 280

66

132.24

6

2.60E−36

374103480

S. hygroscopicus jinggangensis

274

C

235, 169

66

129.53

6

6.40E–37

260646107

S. scabiei

269

C

232, 166

66

128.35

6

2.50E–38

297203088

S. sviceus

295

C

256, 190

66

127.84

6

2.30E–37

29609721

S. avermitilis

247

D

213, 149

64

130.48

6

7.80E–30

297161230

S. bingchenggensis

237

D

203, 139

64

128.67

6

6.10E–33

337765279

S. cattleya

259

D

226, 162

64

130.11

6

9.10E–33

4539208

S. coelicolor ( SCO2139 )

256

D

221, 157

64

128.18

6

2.50E−31

178467673

S. griseus subsp. griseus

249

D

217, 153

64

131.13

6

5.30E−34

374100011

S. hygroscopicus jinggangensis

225

D

190, 126

64

127.83

6

4.10E−30

197720707

S. pristinaespiralis

255

D

222, 158

64

128.94

6

3.30E–31

260650624

S. scabiei

251

D

209, 145

64

128.36

6

8.30E–30

297199120

S. sviceus

256

D

221, 157

64

130.03

6

8.10E−30

178466512

S. griseus subsp. griseus

249

E

181, 129

52

122.50

6

5.20E−25

197722368

S. pristinaespiralis

196

E

176, 123

53

125.71

6

6.40E−23

290958287

S. scabiei

223

E

198, 145

53

127.68

6

2.30E−20

197711057

S. sviceus

197

E

175, 122

53

127.02

6

1.20E−21

  1. Bold characters are used to identify S. coelicolor genes.
  2. aAmino acids.
  3. bActive site.
  4. cTransmembrane helix.