Skip to main content

Advertisement

Table 4 AT content estimation of serovars A–C/D–K

From: Genome expansion in bacteria: the curious case of Chlamydia trachomatis

Genomic fragment + serovar Estimated AT content from fragments Estimated AT content + SNP AT Observed average AT content
Sr L1-L3 + fragment Sr A–C 0.5868286 (0.5868004–0.586857) 0.5871145 (0.5870662–0.587163) 0.586987 (0.586966–0.587008)
Sr L1-L3 + fragment Sr D–K 0.5868445 (0.5868206–0.5868684) 0.5869537 (0.5869141–0.5869932) 0.586941 (0.586923–0.586959)
Sr D-K + fragment Sr A–C 0.586940 (0.5869221–0.5869586) 0.5871161 (0.587082–0.5871508) 0.586987 (0.586966–0.587008)
  1. Estimated average AT content (95 % CI) for Serovars L1–L3 and D–K after the inclusion of genetic fragment average AT content (95 % CI) unique to Serovars A–C and/or D–K (column 2), as described in column 1. In column 3, average SNP AT content differences (95 % CI) between the pathogroups are included to the estimates in column 2. Column 4 describes average AT content (95 % CI) for all nine strains in Serovars A–C (top and bottom row) and the 22 strains in Serovars D–K (middle row)