Fig. 4
From: A cancer cell-line titration series for evaluating somatic classification
Recall performance of the BWA and Strelka pipeline with no GATK realignment or recalibration on the seven tumour cellularities with coverage down-sampled. Unaligned reads were randomly removed to create the down-sampled libraries. Variants were split into three groups based on their allele frequency in the 100Â % tumour sample with maximum coverage, and recall was calculated with respect to this set of variants