Fig. 5
From: A cancer cell-line titration series for evaluating somatic classification
Performance of MuTect and Strelka pipelines on 12 PDAC primary (P) and xenograft (X) exomes. GATK indicates that collapse, realignment and recalibration were performed, and Raw pipelines only include the collapse. Based on these results, we identified the intersection of the calls from MuTect and Strelka run on Raw BWA reads (bottom right) as the best performing somatic variant pipeline