Skip to main content

Table 1 Belvu command-line examples. Examples of the type of processing that can be performed in a single command-line call to Belvu

From: SeqTools: visual tools for manual analysis of sequence alignments

Input Processing Output
Alignment Export to a different format Alignment
Alignment Remove sequences >80 % identical and columns with conservation <0.9 Alignment
Alignment Construct neighbour-joining tree using Kimura distance correction Distance matrix
Distance matrix Reconstruct tree Tree
Alignment Apply bootstrap analysis Bootstrap trees