From: Microsatellite markers for the notothenioid fish Lepidonotothen nudifrons and two congeneric species
Locus name | Accession # | Blastx Top Hit | Repeat content | Primers (5′–3′) | Fluorescent label | Multiplex mix | Ln | Ls | Ll |
---|---|---|---|---|---|---|---|---|---|
Ln_22268 | HACN01006381 | – | (GA)9 | F: TGGATGGTTTTTCGTTTGACCAA R: TGAAGAGCTTTGGAGCAACAA | TAMRA | 1 | M | M | M |
Ln_22517 | HACN01006568 | – | (AT)9 | F: TGATTCATCCTCTGGGTACCAT R: AGCTCGTAGCTATTCCAGCA | HEX | 2 | P | M | – |
Ln_23194 | HACN01007070 | – | (TA)9 | F: TCCGGAGGCTGCGTTCAGAG R: CTGCTTGAGGACCGGCTCAG | HEX | 1 | M | P | P |
Ln_32298 | HACN01014077 | Dolichol-phosphate mannosyltransferase subunit 3 (Q3ZC71) | (AC)9 | F: AAAGTAGTCCGTGCATCCCTT R: GTCTTACGACCTGTTGGAGC | TAMRA | 2 | M | M | M |
Ln_34878 | HACN01015998 | – | (AG)10 | F: GTTGCAGTCACGTTGAAAGC R: ACGAATCCAAACCTTGCAACAT | FAM | 3 | P | – | – |
Ln_35217 | HACN01016251 | – | (CT)9 | F: CCACTACACAGCTGAAATGGT R: GGCATGATTGGAGCACTTCC | HEX | 1 | P | P | P |
Ln_36100 | HACN01016925 | – | (AG)9 | F: TAAAGCTCCAGCCGATACTGG R: TGGGAATTGAACAGATGTCACC | TAMRA | 1 | P | M | P |
Ln_36156 | HACN01016972 | – | (GT)9 | F: GTCTGCTCATGTCCAACACAT R: AGGTGTTTCTGTAAACCCTCG | FAM | 2 | P | P | P |
Ln_40551 | HACN01020461 | – | (TA)9 | F: TAACTGATGCATGCCCAGGAACTT R: GCTTCCTAAAAGCTCCACAGAT | FAM | 1 | P | P | P |
Ln_41246 | HACN01021014 | – | (AT)9 | F: GCTTAAATCCAACCATAGACGCA R: CTCATCAGGACTTCACGTGC | FAM | 2 | M | – | – |
Ln_41281 | HACN01021039 | Uncharacterized protein C1orf21 homolog (Q8K207) | (GT)9 | F: TGTGTTTTTGGACGTATGGCA R: GCTTCCATTTTGGGAGTACCT | HEX | 1 | P | P | P |
Ln_42016 | HACN01021779 | – | (GT)9 | F: ACATCACTTGCAAATAGGCCGGTG R: CCGTCATGCACCTGGGAGTT | HEX | 3 | P | P | P |
Ln_42233 | HACN01021981 | Serine/threonine-protein kinase N2 (A7MBL8) | (AT)9 | F: ATTCCTGACTGCCAAAGACG R: TGTTGACTTGCAGACTGAACG | FAM | 1 | P | M | P |
Ln_42701 | HACN01022446 | Hepatic leukemia factor (Q8BW74) | (AT)9 | F: TGGACTTCACAAGCGTGGCT R: ATTGAAAGTGTGCATAGTCCGT | FAM | 1 | M | M | M |
Ln_45257 | HACN01024934 | – | (TG)9 | F: AAGACCAGGGCGAGTCTGAC R: CTCTAACCAGAACACCGCCT | HEX | 2 | P | P | P |
Ln_45589 | HACN01025236 | – | (AG)9 | F: CGTGTCTAGGAGCTACAGCA R: CCAGGTTGGTGGCATCTCTT | TAMRA | 2 | P | P | P |
Total | 11 | 8 | 10 |