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Table 1 Photosynthesis related genes as targets of identified miRNAs

From: Altered expression profiles of microRNA families during de-etiolation of maize and rice leaves

miRNA Target gene Target loci Cell Annotation
Z. mays
miR395 GRMZM2G051270 chr5:7702383:7702403:+ BS Sulfate adenylyltransferase (APS3)
miR395 GRMZM2G149952 chr1:275091094:275091114:- BS Sulfate adenylyltransferase (APS3)
miR1432 GRMZM2G131489 chr7:81930813:81930833:+   Chlorophyll a/b binding family protein
miR528 GRMZM2G145101 chr7:127586688:127586708:-   Carbonic anhydrase family protein (Beta-CA5)
miR399 GRMZM2G146395 chr2:57541003:57541023:-   FERREDOXIN 3 (ATFD3)
miR171 GRMZM5G800096 Pt:110960:110980:-   A plastid-encoded subunit of a NAD(P)H dehydrogenase complex (NDHD)
O. sativa
miR395 LOC_Os03g53230 chr3:30532638:30532658:- BS Sulfate adenylyltransferase (APS3)
miR6251 LOC_Os03g53230 chr3:30533474:30533494:- BS Sulfate adenylyltransferase (APS3)
miR444 LOC_Os05g47560 chr5:27246682:27246702:- M Chloroplast serine-threonine protein kinase STN7
os_03_07 LOC_Os03g39610 chr3:22001370:22001390:+ M Chlorophyll a/b binding family protein
miR393 LOC_Os08g09860 chr8:5693444:5693464:+   GLYCOLATE OXIDASE 1 (GOX1)
os_04_04 LOC_Os03g19380 chr3:10911399:10911419:+   CP12 domain-containing protein
os_02_15 LOC_Os10g30550 chr10:15887085:15887105:-   Phosphoglycerate kinase
os_12_05 LOC_Os10g30550 chr10:15887086:15887106:-   Phosphoglycerate kinase
  1. Photosynthesis gene list was composed of genes differentially expressed in bundle sheath (BS) and mesophyll (M) cell according to previous studies as well as genes under the “photosynthesis” category of MapMan annotation for maize and rice