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Table 2 10 CpG sites (FDR < 0.01) whose DNA methylation levels were significantly different between obese and non-obese group

From: Differential genome-wide DNA methylation patterns in childhood obesity

ID UCSC_refgene_name Mean_nonobese SD non-obese Mean_obese SD obese t df p.value FDR Mean difference (obese–nonobese) Cohen’s d
cg16507569 COL11A2 0.840 0.164 0.515 0.012 9.972 26.332 <0.001 <0.001 − 0.324 2.208
cg27289463   0.264 0.090 0.432 0.029 − 7.710 21.432 <0.001 0.001 0.169 2.061
cg25013753 ARHGAP22 0.465 0.318 0.035 0.013 6.877 25.396 <0.001 0.001 − 0.430 1.508
cg19697575   0.596 0.366 0.103 0.065 6.354 28.996 <0.001 0.002 − 0.493 1.494
cg26935333   0.397 0.075 0.293 0.020 6.023 24.897 <0.001 0.007 − 0.104 1.539
cg14007688 DBH 0.577 0.290 0.898 0.011 − 5.620 25.354 <0.001 0.009 0.321 1.232
cg22459517 EPS8L1 0.631 0.194 0.851 0.014 − 5.680 26.244 <0.001 0.009 0.220 1.257
cg25813936 GNE 0.793 0.081 0.886 0.012 − 5.523 28.621 <0.001 0.009 0.093 1.268
cg00320354 TSPAN5 0.758 0.178 0.963 0.027 − 5.538 28.730 <0.001 0.009 0.204 1.276
cg08282428 RBM46 0.680 0.070 0.580 0.022 5.897 21.332 <0.001 0.009 − 0.100 1.578
  1. COL11A2 collagen type XI alpha 2 chain, ARHGAP22 rho GTPase activating protein 22, DBH dopamine beta-hydroxylase, EPS8L1 EPS8 like 1, GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, TSPAN5 tetraspanin 5, RBM46 RNA binding motif protein 46