Skip to main content

Table 3 DNA methylation pattern among the peanut genotypes

From: DNA methylation and expression analyses reveal epialleles for the foliar disease resistance genes in peanut (Arachis hypogaea L.)

Sample

Total methylated sites

Genic

Exonic

Intronic

Upstream (2 kb)

Downstream (2 kb)

Intergenic

Unique sites

Genes with methylation

GPBD 4

76,777,778

2,542,609

954,981

1,615,686

2,422,857

2,002,208

74,235,169

8,252,512

53,177

VG 9514

76,330,219

2,491,420

926,732

1,591,061

2,353,495

1,938,882

73,838,799

7,557,697

53,344

ICGV 86855

70,435,291

2,236,778

832,360

1,427,817

2,197,445

1,793,923

68,198,513

7,549,158

51,179

ICGV 86699

76,705,571

2,608,306

1,006,455

1,631,016

2,396,086

1,994,004

74,097,265

7,856,020

54,699

ICGV 99005

78,803,994

2,745,542

1,068,392

1,708,747

2,508,886

2,096,784

76,058,452

8,283,176

55,497

TAG 24

78,535,234

2,591,128

972,282

1,647,757

2,459,092

2,043,738

75,944,106

8,207,597

53,838

TMV 2

69,044,110

2,237,309

853,885

1,407,484

2,143,795

1,756,481

66,806,801

6,575,363

51,866

JL 24

82,137,767

2,755,372

1,042,721

1,743,612

2,574,365

2,137,468

79,382,395

9,190,780

54,645

DER

77,935,584

2,555,262

964,170

1,618,932

2,394,118

1,984,129

75,380,322

7,889,130

53,555

VL 1

80,012,273

2,737,311

1,045,365

1,723,338

2,540,239

2,105,390

77,274,962

8,693,213

54,876

TMV 2-NLM

79,037,016

2,675,872

1,018,559

1,687,698

2,533,141

2,103,929

76,361,144

9,031,971

54,463