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Table 1 Comparative assessment of average genetic diversity estimates of chimpanzees based on STR systems of present and previous studies

From: Applicability of human-specific STR systems, GlobalFiler™ PCR Amplification Kit, Investigator 24plex QS Kit, and PowerPlex® Fusion 6C in chimpanzee (Pan troglodytes)

STR identification Kit Allele Size (AMEL) Total alleles (range) Failed loci Na (Mean ± SE) Ne (Mean ± SE) Ho (Mean ± SE) He (Mean ± SE) uHe (Mean ± SE) F (Mean ± SE)
  Male Female         
#GlobalFiler™ 98, 104 98 55 (6–1) D5S818, SE33, D12S391 3.06 ± 0.36 2.74 ± 0.34 0.46 ± 0.08 0.51 ± 0.07 0.62 ± 0.08 0.06 ± 0.01
#Investigator 24plex QS 77, 80 77 67 (6–1) D12S391, FGA, D7S820 3.72 ± 0.36 3.41 ± 0.35 0.63 ± 0.08 0.61 ± 0.06 0.73 ± 0.07 −0.05 ± 0.10
#PowerPlex® Fusion 6C 80, 86 80 69 (5–1) Penta E, D5S818, SE33,DYS576, DYS570 3.49 ± 0.29 2.95 ± 0.28 0.68 ± 0.07 0.58 ± 0.05 0.76 ± 0.06 −0.19 ± 0.08
*PowerPlex® 21 System 78, 84 78 58 (5–1) D5S818, D12S391 3.05 ± 0.28 2.58 ± 0.26 0.93 ± 0.03 0.52 ± 0.05 0.63 ± 0.06 −0.89 ± 0.17
*SureID® 21G 112, 117 112 62 (6–1) D12S391, D21S11 3.26 ± 0.03 2.84 ± 0.31 0.63 ± 0.07 0.57 ± 0.05 0.68 ± 0.06 −0.13 ± 0.09
*SureID® 23comp 113, 108 108 75 (6–2) D12S391, D8S1132, D2S441 3.75 ± 0.27 3.31 ± 0.26 0.77 ± 0.05 0.66 ± 0.03 0.82 ± 0.03 −0.17 ± 0.09
  1. Na Observed number of alleles, Ne effective number of alleles, Ho observed heterozygosity, He expected heterozygosity, UHe unbiased expected heterozygosity, F fixation index, #Marker systems used in the present study, *Marker system used in the previous studies