Table 1 Assembly summary and contiguity metrics for the shotgun input assembly of PacBio reads and the final scaffolding with proximity ligation (HiC) of the RBSB genome
From: Chromosome length genome assembly of the redbanded stink bug, Piezodorus guildinii (Westwood)
Input assembly | Dovetail HiRise assembly | |
|---|---|---|
Total length (bp) | 1,205,371,278 | 1,205,416,778 |
N50 | 7,401,307 | 170,835,737 |
L50 | 46 | 4 |
Largest scaffold | 29,620,976 | 222,218,125 |
Number of scaffolds | 1262 | 807 |
Number of scaffolds > 1kbp | 1255 | 800 |
Number of gaps | 5 | 460 |
Number of N's per 100 kbp | 0.01 | 3.78 |