From: The mixed liver and kidney transcriptome dataset of Darevskia valentini rock lizard
Label | Name of data file/data set | File types (file extension) | Data repository and identifier (DOI or accession number) |
---|---|---|---|
Data set 1 | Raw RNA reads | Fastq files (.fastq) | NCBI Sequence Read Archivehttps://identifiers.org/ncbi/insdc.sra:SRX14421363 [11] |
Data file 1 | Summary of raw RNA and assembly characteristics | Microsoft Word file (.docx) | |
Data file 2 | De novo assembly by Trinity | Fasta file (.fasta) | NCBI Transcriptome Shotgun Assembly Sequence Databasehttps://identifiers.org/nucleotide:GJZU00000000.1 [14] |
Data file 3 | TransDecoder peptides | Peptide file (.pep) | |
Data file 4 | BLASTp, PFAM, EggNOG proteins | Table (.csv) | figsharehttps://doi.org/10.6084/m9.figshare.17696915.v2 [19] |
Data file 5 | Top GO terms | Compressed PDF files(.zip) | |
Data file 6 | Summary of Trinotate, TransDecoder and top blasted species | Compressed text, Excel and pdf files(.txt, .xls, .pdf) |