Fig. 2

Post-alignment analysis of crypt and control (bulk) whole-genome libraries. (A) Summary of statistical analysis on all, bulk (control), and crypt libraries. Whisker plot presentation of (B) the number of aligned reads in millions (M); (C) median depth of coverage in multiples of genome; (D) percent of the genome covered with 10X, 20X, and 30X depth; and (E) duplication rates in percent of total aligned reads for bulk and crypt libraries. In B) through E), blue represents bulk libraries; red represents crypt libraries; the brackets indicate the range; and the average is shown above each bar