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Table 1 Primers and probes designed from the VP1 region of FMDV.

From: A TaqMan-based RT-qPCR assay for serotyping of Southern African territories (SAT) 2 strains of Foot-and-Mouth disease virus (FMDV) in Southern Africa

Primer name

Sequence (5’-3’)

Primer/probe orientation

ST2-VP1_F

TTCGTSCTBGACAGRTTCACACAYG

+

ST2-VP1_R

GACWYYGTTGTGTGARAAMACC

-

ST2-VP1_R2

CGGGGYGCVCCGTTGGGCTG

-

ST2-VP1_Probe

FAM-GTGGACCTSATGGACACCAAGGARAA-BHQ-1

+