Skip to main content

Table 2 Detection of BM/BP-derived genes, blaTEM, and others in matched pairs of thermal/chemical samples (n = 51)

From: Impact of template denaturation prior to whole genome amplification on gene detection in high GC-content species, Burkholderia mallei and B. pseudomallei

Denaturation

Thermal (−)/chemical (−)

Thermal ( +) /chemical ( +)

Thermal (−)/chemical ( +)

Thermal ( +)/chemical (−)

McNemar’s P

aac(6)

15

8

24

4

 < 0.001

blaBP/MBL-1

27

1

23

 < 0.001

blaBP/MBL-3

38

12

1

0.006

blaABPS

23

1

23

4

 < 0.001

blaOXA-42/43

19

20

12

0.001

macB

22

1

28

 < 0.001

penA-BP

9

9

32

1

 < 0.001

qacE

43

6

1

0.131

blaTEM

35

16

 < 0.001

Other non-BM/BP genes (18 genes)

874

32

12

0.004

TOTAL

1024 (74%)

121 (9%)

192 (14%)

39 (3%)