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Table 2 Majority of origins are more susceptible to SIDD than NOIRs and genes

From: Analysis of stress-induced duplex destabilization (SIDD) properties of replication origins, genes and intergenes in the fission yeast, Schizosaccharomyces pombe

G(x) cut off value (kcal/mol)

OIRs

Genes (360)

NOIRs (434)

% Intergenes (OIRs+NOIRs) predicted as origins

 

Origins (564)

Weak origins(440)

   

2.0

470 (83.3%)

283 (64.3%)

5 (1.4%)

232 (53.5%, 39%*)

76.45 (80.41*)

2.5

503 (89.2%)

316 (71.8%)

6 (1.7%)

261 (60.1%, 48%*)

75.83 (80.27*)

3.0

516 (91.4%)

338 (76.8%)

6 (1.7%)

283 (65.2%, 52%*)

75.1 (79.68*)

  1. *After excluding NOIRs that correspond to some of the recently reported origins [38].
  2. Numbers of OIRs, genes, and NOIRs falling in the three lowest G(x) cut off categories. Their percentages are indicated in parentheses. Note that a vast majority (>76 to >80%) of the intergenic regions falling in these categories correspond to putative replication origins.
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BMC Research Notes

ISSN: 1756-0500

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