- Research note
- Open Access
Improving redox sensitivity of roGFP1 by incorporation of selenocysteine at position 147
© The Author(s) 2018
- Received: 8 October 2018
- Accepted: 13 November 2018
- Published: 22 November 2018
Redox-sensitive green fluorescent protein (roGFP) is a genetically-encoded redox-sensitive protein used to detect cellular oxidative stress associated with reactive oxygen species production. Here we replaced the cysteine at position 147 of roGFP1 (variant of roGFP) with selenocysteine in order to increase redox sensitivity of the redox reporter.
Expression of roGFP1 selenoprotein (roGFP1-Se147) in HEK293 cells required the presence of a selenocysteine insertion sequence and was augmented by co-expression with SBP2. roGFP1-Se147 demonstrated a similar excitation and emission spectra to roGFP1. Although expression of roGFP1-Se147 was limited, it was sufficient enough to perform live cell imaging to evaluate sensitivity to oxidation and reduction. roGFP1-Se147 exhibited a 100-fold increase in sensitivity to oxidation with H2O2 in comparison to roGFP1 as well as a 20-fold decrease in the EC50 of H2O2. Furthermore, roGFP1-Se147, unlike roGFP1, was able to detect oxidation caused by the mitochondrial electron transport complex III inhibitor antimycin A. Unfortunately roGFP-Se147 exhibited a diminished dynamic range and photoinstability.
- Green fluorescent protein
- Reactive oxygen species
Investigations into reactive oxygen species (ROS) signaling has been hindered by a lack of available methods to accurately measure small and localized ROS fluctuations. Unfortunately, redox-sensitive dyes often lack the ability to localize in sub-cellular compartments and are generally incompatible with in vivo use. Genetically-encoded reporter proteins such as redox-sensitive green fluorescent protein (roGFP) have been used in vivo and targeted to many organelles, but they lack the sensitivity of dyes [1–5]. Although roGFP2 is sensitive to hypoxia-mediated ROS production, its responses are slow [1, 6], suggesting significant limitations for the detection of local, small-scale, and transient fluctuations involved in physiologic ROS signaling.
roGFP1 is a commonly used variant of roGFP that is largely unaffected by pH and produces a strong fluorescent signal . roGFP1 contains two redox-sensitive cysteines at amino acids 147 and 204 which serve as a biological switch. Oxidation and reduction of these cysteines shifts fluoresce between two excitation maxima (405 and 470 nm) [1, 8]. As such, redox state is expressed as a ratio of these excitation maxima (405/470). Upon exposure to an oxidative environment (either ROS or oxidized glutathione), the redox-sensitive cysteines are oxidized, resulting in intramolecular disulfide bond formation, increased fluorescence at 405 nm and decreased fluorescence at 470 nm (increased 405/470 ratio) . Reduced glutathione reduces the disulfide bond, restoring fluorophore structure and fluorescent properties to the pre-oxidized state.
Despite these ratiometric and reversible properties, roGFP’s lack of sensitivity renders it unsuitable for detecting ROS fluctuations involved in physiologic signaling . One factor contributing to its relative insensitivity is the protonation of its redox-sensitive cysteines under physiologic cellular conditions: only deprotonated cysteines are able to react with ROS . To overcome this barrier, several attempts have been made to decrease the pKa (from ~ 8.2) of the roGFP1 cysteines by mutating surrounding amino acids . Unfortunately, the resulting proteins also lacked the sensitivity to detect small ROS fluctuations. An alternative approach to increase the sensitivity of roGFP1 is to replace the relevant cysteines with selenocysteine, a more reactive nucleophile with a lower pKa (5.5 vs 8.2) . Selenocysteine is capable of forming bridges upon oxidation with either selenocysteine or cysteine .
Selenocysteine incorporation into proteins is complex and inefficient compared to insertion of canonical amino acids. Selenocysteine incorporation occurs at UGA codons, which typically serve to stop protein translation . Thus, incorporation requires additional elements including a selenocysteine insertion sequence (SECIS) in the 3′ untranslated region of the mRNA and a selenocysteine specific elongation factor [14–17]. Here we attempted to increase the sensitivity of roGFP1 by mutating the functional cysteine (at position 147) to selenocysteine (roGFP1-Se147). Though roGFP1-Se147 demonstrated increased ROS sensitivity, it exhibited a poor dynamic range and photoinstability.
Methods and results
All roGFP constructs were derived from roGFP1-N1  (Additional file 1: Methods). To maximize selenoprotein expression, we used two systems for expression of the roGFP1 selenoprotein (roGFP1-Se147): pLuc01 and pSel. Both selenoprotein expression vectors (selenovectors) contained a 3′ SECIS element. To increase selenocysteine incorporation, roGFP1-Se147 was co-expressed with selenocysteine binding protein 2 (SBP2) by either co-transfection of a second plasmid (pLuc01 system) or co-expression on the same vector (pSel system). The pLuc01 system involved co-transfection of two plasmids: the LucC258U/wtP plasmid containing a 3′ PHGPx SECIS element , and the hSBP2/V5-HIS plasmid, contained human SBP2. The pSel system utilized a dual expression in the pSelExpress1 plasmid which contains a modified Toxoplasma gondii SECIS element and the C terminal functional domain of rat SBP2 .
Using transfected HEK293T cells suspended in PBS, we evaluated the excitation (detected at 530 nm, Fig. 1b) and emission spectra (excited at 405 nm, Fig. 1c) of GFP, roGFP1-pSel and roGFP1-Se147pSel. To account for the differences in expression efficiency (GFP > roGFP1-pSel > roGFP1-Se147pSel), spectral data was normalized to maximal peak for each fluorescent protein. Redox-insensitive GFP exhibited a large excitation peak at ~ 480 nm and roGFP1-pSel exhibited two excitation peaks with the largest peak at ~ 405 nm and a smaller peak at ~ 475 nm, consistent with previous studies . The excitation spectrum for roGFP1-Se147pSel was similar to roGFP1-pSel with its maximum at ~ 405 nm. All proteins exhibited similar emission spectra with a single maximum at ~ 530 nm.
In order to determine the redox-sensitivity of roGFP1-Se147pSel while minimizing any excitation-associated photoinstability, we reduced the exposure time and frequency of the sequential excitation. As the baseline for roGFP1-Se147pSel was greater than roGFP1-pSel, we normalized results (fold change baseline) to facilitate comparison between the constructs. As before, HEK293 cells transfected with roGFP1-pSel exhibited a robust response to ≥ 30 µM H2O2 (p < 0.05), but again failed to respond to 3 µM H2O2 (p > 0.05) (Fig. 2d). Whereas cells transfected with roGFP1-Se147pSel exhibited an increased normalized 405/470 ratio in response to ≥ 300 nM H2O2 (p < 0.05) (Fig. 2e). Thus the threshold for H2O2 detection for roGFP1-Se147pSel was approximately 100-fold lower than that of roGFP1-pSel. Curve fitting of the dose–response relationships showed that roGFP1-Se147pSel was approximately 20 times more sensitive to oxidation with H2O2 compared to roGFP1-pSel (EC50 of 9.8 × 10−7 M and 2.0 × 10−5 M, respectively) (Fig. 2f). Consistent with our previous data, roGFP1-Se147pSel demonstrated a greatly diminished dynamic range compared to roGFP1-pSel.
We next evaluated the sensitivity of the selenoprotein to endogenous ROS evoked by the mitochondrial complex III inhibitor antimycin A in HEK293 cells [21, 22]. Antimycin A (10 µM) failed to increase the 405/470 ratio of HEK293 transfected with roGFP1-pSel (p > 0.05, compared to untreated cells) (Fig. 2g). Whereas antimycin A increased the 405/470 ratio of HEK293 transfected with roGFP1-Se147pSel (p < 0.05), compared to the 0.1% ethanol vehicle or untreated control) (Fig. 2h). Unexpectedly, the 0.1% ethanol vehicle decreased the roGFP1-pSel 405/470 ratio (p < 0.01) but this did not occur with roGFP1-Se147pSel (p > 0.05). Overall, the data suggest that roGFP1-Se147pSel is sufficiently sensitive to detect endogenous oxidative stress produced downstream of mitochondrial dysfunction.
The mutation of cysteine to selenocysteine (UGA) at position 147 in both selenovectors yielded a full-length protein (~ 27 kDa), indicating successful incorporation of the selenocysteine. We found that the pSelExpress1 vector (containing both the selenoprotein and SBP2) produced relatively more selenoprotein, consistent with its reported increased efficiency . Spectral analysis revealed similar excitation and emission spectra for both roGFP1 and roGFP1-Se147, indicating that the 405/470 ratio was appropriate for determining redox-sensitivity of roGFP1-Se147. Despite the low selenoprotein expression, sufficient roGFP1-Se147 was expressed in some HEK293 cells to perform fluorescent live cell imaging. Consistent with previous reports cells transfected with roGFP1 responded robustly to substantial oxidation caused by concentrations of ≥ 30 µM H2O2, but failed to respond to either 3 µM H2O2 or 10 µM antimycin A . Cells transfected with roGFP1-Se147 demonstrated a 100-fold lower H2O2 detection threshold than those transfected with roGFP1. Furthermore, cells transfected with roGFP1-Se147 demonstrated sufficient sensitivity to detect mitochondrial ROS evoked by > 30 s treatment with the mitochondrial complex III inhibitor antimycin A. Our previous studies have shown that antimycin A causes mitochondrial ROS production and mitochondrial depolarization within 30 s . Thus our data indicates increased sensitivity of the selenoprotein redox sensor to oxidation with both exogenous and endogenous ROS. Consistent with its structural similarities to GFP, roGFP1-Se147 was expressed within the cytosolic compartment.
Unfortunately, roGFP1-Se147 exhibited a decreased dynamic range and photoinstability. By decreasing the excitation exposure to roGFP1-Se147, we were able to resolve stimuli-induced responses. However, these characteristics limit the usefulness of this roGFP1-Se147 as an effective reporter. Both the diminished dynamic range and photoinstability can likely be attributed to unforeseen structural consequences resulting from the replacement of cysteine with selenocysteine. Other studies have shown that roGFP1 exhibits some photoswitching with prolonged exposure to 405 nm light . This results in a shift toward the 470 nm excitation maximum independent of disulfide bond formation. It is possible that selenocysteine altered the protein structure in such a way that it worsened the existing photoinstability of roGFP1.
Most selenoproteins have a single selenocysteine residue . Selenocysteine incorporation requires multiple elements including SECIS, a selenocysteine specific elongation factor and selenium. As such, the incorporation efficiency of selenocysteine is reduced compared to that of canonical amino acids [26–28]. Here, we found that expression levels of roGFP1-Se147 were greatly reduced but were sufficient in individual cells. Furthermore, the functionality (dynamic range, photostability) was disrupted. Previous studies have successfully inserted selenocysteine (in the place of cysteine) into proteins normally lacking selenocysteine including luciferase, rat growth hormone receptor, thyroid hormone receptor, glutaredoxin and plant phospholipid hydroperoxide glutathione peroxidase [26, 29–31]. Thus, the decreased functionality of roGFP1-Se147 is likely a specific effect on roGFP1, rather than a general property of non-native selenocysteine incorporation.
Despite the functional changes in 405/470 ratio of roGFP1-Se147 in HEK293 cells upon exposure to H2O2 and antimycin A, we were unable to demonstrate redox-induced fluorescence changes in purified roGFP1-Se147. While the decreased expression of roGFP1-Se147 hindered the spectral analysis, we believe this is not solely responsible for the lack of measurable redox sensitivity. Such a state suggests that either the selenocysteine or cysteine within the redox-sensing moiety of the roGFP have become oxidized sufficiently that it is no longer sensitive to reducing agents. We have previously shown that roGFP1 loses the ability to report redox status following cysteine covalent modification by n-methyl-maleimide . Despite selenocysteines being more sensitive to oxidation than cysteines, cysteines are more sensitive to ‘over-oxidation’, i.e. into sulfinic and sulfonic states, than selenocysteines . Indeed, the presence of a selenocysteine may increase the ‘over-oxidation’ of cysteines . It is possible that the roGFP1-Se147 became irreversible oxidized during the extraction/purification protocol. Without a redox titration of roGFP1-Se147, we cannot prove that this particular roGFP construct is directly modified by redox environment. As such, we have no mechanistic evidence that the increased sensitivity of changes in 405/470 ratio of roGFP1-Se147 in HEK293 cells upon exposure to low levels of H2O2 is due to a shift in the redox potential of the redox-sensing moiety.
In conclusion, we present a selenocysteine-containing mutant of roGFP1 that displays an apparent increased sensitivity to ROS but also has decreased dynamic range and photoinstability. The development of probes with increased sensitivity is a pre-requisite for the understanding of the multiple roles of ROS and oxidative stress in physiological and pathophysiological processes.
KRS and TTC designed the study. KRS, JMA, PKB and SHH performed the experiments. KRS and TTC wrote the manuscript. All authors reviewed the manuscript. All authors read and approved the final manuscript.
The authors would like to thank Dr. SJ Remington (University of Oregon), Dr. P Copeland (Rutgers University) and Dr. V Gladyshev (Brigham and Women’s Hospital, Harvard Medical School) for their generous plasmid gifts. This work was supported by the National Heart Lung & Blood Institute (R01HL119802).
The authors declare that they have no competing interests.
Availability of data/materials
The datasets used and analyzed during the current study are available from the corresponding author on reasonable request.
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This work was funded by the National Institutes of Health R01HL119802. The funding body contributed financial support but did not participate directly in the design, data collection, analysis, interpretation and writing of this study/manuscript.
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- Dooley CT, Dore TM, Hanson GT, Jackson WC, Remington SJ, Tsien RY. Imaging dynamic redox changes in mammalian cells with green fluorescent protein indicators. J Biol Chem. 2004;279(21):22284–93.View ArticleGoogle Scholar
- Chen X, Tian X, Shin I, Yoon J. Fluorescent and luminescent probes for detection of reactive oxygen and nitrogen species. Chem Soc Rev. 2011;40(9):4783–804.View ArticleGoogle Scholar
- Guo H, Aleyasin H, Dickinson BC, Haskew-Layton RE, Ratan RR. Recent advances in hydrogen peroxide imaging for biological applications. Cell Biosci. 2014;4(1):64.View ArticleGoogle Scholar
- Breckwoldt MO, Pfister FM, Bradley PM, Marinkovic P, Williams PR, Brill MS, et al. Multiparametric optical analysis of mitochondrial redox signals during neuronal physiology and pathology in vivo. Nat Med. 2014;20(5):555–60.View ArticleGoogle Scholar
- Wagener KC, Kolbrink B, Dietrich K, Kizina KM, Terwitte LS, Kempkes B, et al. Redox indicator mice stably expressing genetically encoded neuronal roGFP: versatile tools to decipher subcellular redox dynamics in neuropathophysiology. Antioxid Redox Signal. 2016;25(1):41–58.View ArticleGoogle Scholar
- Waypa GB, Marks JD, Guzy R, Mungai PT, Schriewer J, Dokic D, et al. Hypoxia triggers subcellular compartmental redox signaling in vascular smooth muscle cells. Circ Res. 2010;106(3):526–35.View ArticleGoogle Scholar
- Roma LP, Duprez J, Takahashi HK, Gilon P, Wiederkehr A, Jonas JC. Dynamic measurements of mitochondrial hydrogen peroxide concentration and glutathione redox state in rat pancreatic beta-cells using ratiometric fluorescent proteins: confounding effects of pH with HyPer but not roGFP1. Biochem J. 2012;441(3):971–8.View ArticleGoogle Scholar
- Hanson GT, Aggeler R, Oglesbee D, Cannon M, Capaldi RA, Tsien RY, et al. Investigating mitochondrial redox potential with redox-sensitive green fluorescent protein indicators. J Biol Chem. 2004;279(13):13044–53.View ArticleGoogle Scholar
- Roberts DD, Lewis SD, Ballou DP, Olson ST, Shafer JA. Reactivity of small thiolate anions and cysteine-25 in papain toward methyl methanethiosulfonate. Biochemistry. 1986;25(19):5595–601.View ArticleGoogle Scholar
- Cannon MB, Remington SJ. Re-engineering redox-sensitive green fluorescent protein for improved response rate. Protein Sci. 2006;15(1):45–57.View ArticleGoogle Scholar
- Byun BJ, Kang YK. Conformational preferences and pK(a) value of selenocysteine residue. Biopolymers. 2011;95(5):345–53.View ArticleGoogle Scholar
- Muller S, Senn H, Gsell B, Vetter W, Baron C, Bock A. The formation of diselenide bridges in proteins by incorporation of selenocysteine residues: biosynthesis and characterization of (Se)2-thioredoxin. Biochemistry. 1994;33(11):3404–12.View ArticleGoogle Scholar
- Chambers I, Frampton J, Goldfarb P, Affara N, McBain W, Harrison PR. The structure of the mouse glutathione peroxidase gene: the selenocysteine in the active site is encoded by the ‘termination’ codon, TGA. EMBO J. 1986;5(6):1221–7.View ArticleGoogle Scholar
- Tujebajeva RM, Copeland PR, Xu XM, Carlson BA, Harney JW, Driscoll DM, et al. Decoding apparatus for eukaryotic selenocysteine insertion. EMBO Rep. 2000;1(2):158–63.View ArticleGoogle Scholar
- Zinoni F, Heider J, Bock A. Features of the formate dehydrogenase mRNA necessary for decoding of the UGA codon as selenocysteine. Proc Natl Acad Sci USA. 1990;87(12):4660–4.View ArticleGoogle Scholar
- Copeland PR, Fletcher JE, Carlson BA, Hatfield DL, Driscoll DM. A novel RNA binding protein, SBP2, is required for the translation of mammalian selenoprotein mRNAs. EMBO J. 2000;19(2):306–14.View ArticleGoogle Scholar
- Copeland PR, Stepanik VA, Driscoll DM. Insight into mammalian selenocysteine insertion: domain structure and ribosome binding properties of Sec insertion sequence binding protein 2. Mol Cell Biol. 2001;21(5):1491–8.View ArticleGoogle Scholar
- Mehta A, Rebsch CM, Kinzy SA, Fletcher JE, Copeland PR. Efficiency of mammalian selenocysteine incorporation. J Biol Chem. 2004;279(36):37852–9.View ArticleGoogle Scholar
- Novoselov SV, Lobanov AV, Hua D, Kasaikina MV, Hatfield DL, Gladyshev VN. A highly efficient form of the selenocysteine insertion sequence element in protozoan parasites and its use in mammalian cells. Proc Natl Acad Sci USA. 2007;104(19):7857–62.View ArticleGoogle Scholar
- Bahia PK, Parks TA, Stanford KR, Mitchell DA, Varma S, Stevens SM Jr, et al. The exceptionally high reactivity of Cys 621 is critical for electrophilic activation of the sensory nerve ion channel TRPA1. J Gen Physiol. 2016;147(6):451–65.View ArticleGoogle Scholar
- Turrens JF, Alexandre A, Lehninger AL. Ubisemiquinone is the electron donor for superoxide formation by complex III of heart mitochondria. Arch Biochem Biophys. 1985;237(2):408–14.View ArticleGoogle Scholar
- Gyulkhandanyan AV, Pennefather PS. Shift in the localization of sites of hydrogen peroxide production in brain mitochondria by mitochondrial stress. J Neurochem. 2004;90(2):405–21.View ArticleGoogle Scholar
- Stanford KR, Taylor-Clark TE. Mitochondrial modulation-induced activation of vagal sensory neuronal subsets by antimycin A, but not CCCP or rotenone, correlates with mitochondrial superoxide production. PLoS ONE. 2018;13(5):e0197106.View ArticleGoogle Scholar
- Schwarzlander M, Fricker MD, Muller C, Marty L, Brach T, Novak J, et al. Confocal imaging of glutathione redox potential in living plant cells. J Microsc. 2008;231(2):299–316.View ArticleGoogle Scholar
- Kryukov GV, Castellano S, Novoselov SV, Lobanov AV, Zehtab O, Guigo R, et al. Characterization of mammalian selenoproteomes. Science. 2003;300(5624):1439–43.View ArticleGoogle Scholar
- Leonard JL, Leonard DM, Shen Q, Farwell AP, Newburger PE. Selenium-regulated translation control of heterologous gene expression: normal function of selenocysteine-substituted gene products. J Cell Biochem. 1996;61(3):410–9.View ArticleGoogle Scholar
- Lesoon A, Mehta A, Singh R, Chisolm GM, Driscoll DM. An RNA-binding protein recognizes a mammalian selenocysteine insertion sequence element required for cotranslational incorporation of selenocysteine. Mol Cell Biol. 1997;17(4):1977–85.View ArticleGoogle Scholar
- Gonzalez-Flores JN, Shetty SP, Dubey A, Copeland PR. The molecular biology of selenocysteine. Biomol Concepts. 2013;4(4):349–65.View ArticleGoogle Scholar
- Latreche L, Jean-Jean O, Driscoll DM, Chavatte L. Novel structural determinants in human SECIS elements modulate the translational recoding of UGA as selenocysteine. Nucleic Acids Res. 2009;37(17):5868–80.View ArticleGoogle Scholar
- Ge Y, Qi Z, Wang Y, Liu X, Li J, Xu J, et al. Engineered selenium-containing glutaredoxin displays strong glutathione peroxidase activity rivaling natural enzyme. Int J Biochem Cell Biol. 2009;41(4):900–6.View ArticleGoogle Scholar
- Hazebrouck S, Camoin L, Faltin Z, Strosberg AD, Eshdat Y. Substituting selenocysteine for catalytic cysteine 41 enhances enzymatic activity of plant phospholipid hydroperoxide glutathione peroxidase expressed in Escherichia coli. J Biol Chem. 2000;275(37):28715–21.View ArticleGoogle Scholar
- Snider GW, Ruggles E, Khan N, Hondal RJ. Selenocysteine confers resistance to inactivation by oxidation in thioredoxin reductase: comparison of selenium and sulfur enzymes. Biochemistry. 2013;52(32):5472–81.View ArticleGoogle Scholar
- Dillard CJ, Tappel AL. Mercury, silver, and gold inhibition of selenium-accelerated cysteine oxidation. J Inorg Biochem. 1986;28(1):13–20.View ArticleGoogle Scholar